AllTheBacteria AllTheBacteria AllTheBacteria Resources Participants Publications Docs
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      • Documentation
        • Overview
        • Metadata and QC
        • OSF links
        • SQLite metadata
        • Assemblies
        • Species identification
        • Annotation
        • Antimicrobial resistance
        • Defense systems
        • Biosynthetic gene clusters
        • Hypothetical protein structures
        • WhatsGNU protein allele frequencies
        • Species specific typing
        • Archaea
        • Sequence alignment with LexicMap
        • Sequence distances with sketchlib
        • Contributing to AllTheBacteria
        • Batch downloading from OSF
        • FAQ
        • Release history
        • Migration from EBI FTP to OSF
      • Participants
      • Publications
      • Resources

        Resources

        Preprint

        Preprint describing the current state of data and analysis

        Documentation

        Full documentation on all aspects of the data

        Source Code

        Code used to generate the data

        Data Archive

        All generated data from AllTheBacteria on OSF

        Files on the cloud

        Cloud access to assemblies and search indices, enabled by AWS Open Data programme

        How to contribute data

        We welcome you to join the ATB contributors!

        🧫
        AllTheBacteria is still under active development and so resources are still being added to, though versioned resources are stable.